Coconut Lime Yogurt Muffins – Bright, Moist, and Easy
Tart lime, sweet coconut, and creamy yogurt come together in a muffin that tastes like sunshine. These Coconut Lime Yogurt Muffins are soft, tender, and full of fresh citrus flavor. They’re the kind of bake that smells amazing in the oven and disappears quickly on the counter.
Whether you want a quick breakfast, a lunchbox treat, or a light dessert, this recipe delivers. No special tools, no tricky steps—just simple ingredients and a bright, tropical payoff.
Why This Recipe Works

- Yogurt keeps the muffins moist without making them heavy. It adds a gentle tang that balances the sweetness.
- Lime zest carries more flavor than juice, so you get a bold citrus aroma without thinning the batter.
- Coconut adds texture and warmth.
A mix of shredded coconut and coconut milk (or oil) makes a tender crumb and a toasty finish.
- Just-right sweetness lets the lime shine. These taste bright, not cloying.
- One-bowl friendly with minimal cleanup. Stir, scoop, bake, and enjoy.
Shopping List
- All-purpose flour
- Granulated sugar (or coconut sugar)
- Baking powder
- Baking soda
- Fine sea salt
- Plain Greek yogurt (full-fat or 2%)
- Coconut milk (canned, well-shaken) or neutral oil (like vegetable or melted coconut oil)
- Large eggs
- Unsalted butter (melted and cooled) or additional oil
- Fresh limes (for zest and juice)
- Vanilla extract
- Unsweetened shredded coconut
- Optional: Turbinado sugar for topping
- Optional: Powdered sugar for a quick lime glaze
Step-by-Step Instructions

- Prep the pan and oven. Heat the oven to 375°F (190°C).
Line a 12-cup muffin pan with paper liners or grease well. This helps prevent sticking and gives a clean release.
- Zest and juice the limes. Zest 2 limes right over the bowl to catch the oils, then juice them. You’ll use the zest in the batter and 1–2 tablespoons of juice to brighten the flavor.
- Mix dry ingredients. In a large bowl, whisk 2 cups all-purpose flour, 3/4 cup sugar, 2 teaspoons baking powder, 1/2 teaspoon baking soda, and 1/2 teaspoon salt.
Stir in 3/4 cup unsweetened shredded coconut.
- Combine wet ingredients. In a separate bowl or large measuring cup, whisk 1 cup Greek yogurt, 1/3 cup coconut milk (or oil), 2 large eggs, 4 tablespoons melted butter (or more oil), 1–2 tablespoons lime juice, 2 teaspoons vanilla, and the lime zest.
- Bring the batter together. Pour the wet ingredients into the dry. Stir gently with a spatula until just combined. A few small streaks of flour are fine. Do not overmix—that keeps the muffins tender.
- Portion and top. Divide the batter among the muffin cups, filling each about 3/4 full.
If you like, sprinkle the tops with extra shredded coconut or a pinch of turbinado sugar for crunch.
- Bake. Place on the center rack and bake 16–20 minutes. They’re done when the tops are set, lightly golden at the edges, and a toothpick comes out with a few moist crumbs.
- Cool. Let muffins cool in the pan for 5 minutes, then move to a rack. This keeps the bottoms from steaming and turning soggy.
- Optional glaze. Whisk 1/2 cup powdered sugar with 1–2 teaspoons lime juice until smooth.
Drizzle over cooled muffins for extra citrus pop.
Storage Instructions
- Room temperature: Store in an airtight container for up to 2 days. Add a paper towel under and over the muffins to absorb moisture.
- Refrigerator: Keeps for 4–5 days. Warm slightly in the microwave or toaster oven to refresh the texture.
- Freezer: Wrap each muffin individually and freeze for up to 2 months.
Thaw at room temp or reheat from frozen for 20–30 seconds in the microwave or 8–10 minutes in a 300°F (150°C) oven.
- Glaze note: If glazing, let the glaze set before storing to prevent sticking.

Why This is Good for You
- Protein from Greek yogurt helps keep you full and supports muscle recovery.
- Healthy fats from coconut contribute to satiety and a satisfying crumb, reducing the urge to snack later.
- Vitamin C from lime supports immune health and adds brightness without extra sugar.
- Smarter sweetness—these muffins rely on natural tang and aroma, so they taste flavorful without being overly sweet.
Common Mistakes to Avoid
- Overmixing the batter: This leads to tough, rubbery muffins. Stir until just combined.
- Skipping the zest: Lime zest is where the flavor lives. Don’t rely on juice alone.
- Using watery yogurt: If your yogurt is thin, strain it briefly or reduce other liquids to prevent a dense or soggy crumb.
- Overbaking: Check early.
Coconut can brown quickly, and dry muffins lose their charm.
- Cold ingredients: Let eggs and yogurt come to room temperature for better mixing and rise.
Recipe Variations
- Blueberry Coconut Lime: Fold in 1 cup fresh or frozen blueberries (no thawing). Toss berries in a spoonful of flour to prevent sinking.
- Pineapple Lime: Stir in 3/4 cup well-drained crushed pineapple. Reduce coconut milk by 1–2 tablespoons if the batter seems loose.
- Almond Twist: Swap vanilla for almond extract (1 teaspoon) and top with sliced almonds before baking.
- Gluten-Free: Use a 1:1 gluten-free baking flour blend.
Let the batter rest 10 minutes before scooping to hydrate the starches.
- Dairy-Free: Use coconut yogurt and oil instead of butter. The texture stays soft and the coconut flavor shines.
- Lime Poppy Seed: Add 1 tablespoon poppy seeds for a gentle crunch and bakery-style look.
FAQ
Can I use regular yogurt instead of Greek yogurt?
Yes, but choose a thicker style. If it’s very runny, reduce the coconut milk or oil by 1–2 tablespoons to keep the batter from getting too loose.
Do I have to use coconut milk?
No.
You can use a neutral oil, melted coconut oil, or even milk. Coconut milk adds richness and mild coconut flavor, but the muffins still work without it.
Can I make these muffins with whole wheat flour?
You can swap up to half the all-purpose flour for white whole wheat flour. Expect a slightly heartier texture.
Keep the batter soft and avoid overmixing.
How do I get a taller muffin top?
Fill the cups about 3/4 full, bake at 375°F, and avoid overmixing. Chilling the filled pan for 10 minutes before baking can also help with lift.
What if I only have limes that are a bit dry?
Microwave a lime for 10–15 seconds, roll it firmly on the counter, and then zest first before juicing. If you’re short on juice, up the zest for flavor.
Can I make mini muffins?
Yes.
Bake 10–12 minutes at 375°F. Start checking early—mini muffins go from done to dry quickly.
How sweet are these muffins?
They’re mildly sweet with a bright lime finish. If you prefer dessert-level sweetness, add 2–3 tablespoons more sugar or finish with the lime glaze.
Do these muffins freeze well?
They freeze beautifully.
Wrap individually, freeze, and reheat as needed. The texture stays soft, especially if you warm them briefly before serving.
Can I toast the coconut?
Absolutely. Lightly toast the shredded coconut in a dry skillet over medium heat until golden, then cool.
It deepens the flavor and adds a subtle crunch.
What’s the best way to prevent sticking?
Use paper liners or a well-greased nonstick pan and let muffins cool for 5 minutes before removing. A quick run of a butter knife around the edges helps release stubborn ones.
In Conclusion
Coconut Lime Yogurt Muffins are bright, tender, and simple enough for any day of the week. With pantry staples and a couple of fresh limes, you can bake something that feels special without much effort.
Keep a batch on hand for breakfasts, snacks, and quick treats. They’re easy to love—and even easier to make again.
Printable Recipe Card
Want just the essential recipe details without scrolling through the article? Get our printable recipe card with just the ingredients and instructions.






